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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
4
Hi-C
4
total RNA-seq
1
WGBS
Assay category
18
DNA binding
4
3D chromatin structure
4
Transcription
1
DNA methylation
Target of assay
17
control
1
histone
1
histone modification
1
narrow histone mark
Date released
21
October, 2019
5
July, 2019
February, 2020
1
May, 2019
Available data
114
bam
bed narrowPeak
91
bigWig
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
4
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
27
Homo sapiens
Biosample type
27
tissue
Organ
727
pancreas
604
connective tissue
475
adipose tissue
370
epithelium
331
liver
151
bone element
107
heart
105
kidney
94
vasculature
92
blood vessel
71
brain
63
artery
34
musculature of body
27
eye
27
limb
20
lung
15
blood
15
bodily fluid
15
embryo
15
nerve
11
spleen
9
vein
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
27
AMP
Genome assembly (visualization)
5
GRCh38
4
hg19
Lab
27
AMP-T2D consortium
files.file_type!
bed narrowPeak
month_released!
August, 2021
February, 2020
organ_slims!
esophagus
BIOSAMPLE
ASSAY
27 results
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Clear Filters
ChIP-seq
Hi-C
total RNA-seq
WGBS
tissue
tibial nerve
11
4
tibial artery
5
gastrocnemius medialis
4
muscle of leg
1
1
islet of Langerhans
1
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