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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
total RNA-seq
4
pCHi-C
3
ChIP-seq
1
ATAC-seq
1
RRBS
Assay category
19
Transcription
3
DNA binding
1
DNA accessibility
1
DNA methylation
Target of assay
2
histone
2
histone modification
2
narrow histone mark
1
control
Date released
21
October, 2019
4
February, 2023
1
February, 2020
1
July, 2019
1
June, 2019
Available data
bed narrowPeak
7
bam
6
bigBed narrowPeak
6
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
28
Homo sapiens
Biosample type
26
tissue
2
primary cell
Organ
718
pancreas
581
connective tissue
458
adipose tissue
363
epithelium
330
liver
202
heart
168
kidney
151
bone element
99
vasculature
97
blood vessel
74
brain
67
artery
32
musculature of body
30
limb
28
eye
23
embryo
20
lung
16
nerve
12
blood
12
bodily fluid
8
skeleton
6
spleen
5
gonad
5
ovary
5
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
28
AMP
Genome assembly (visualization)
1
hg19
Lab
28
AMP-T2D consortium
files.file_type!
bed narrowPeak
month_released!
December, 2019
November, 2018
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
28 results
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Clear Filters
total RNA-seq
pCHi-C
ChIP-seq
ATAC-seq
RRBS
tissue
islet of Langerhans
14
4
2
1
retina
3
pigmented layer of retina
2
primary cell
retinal pigment epithelial cell
1
1
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