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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
snATAC-seq
3
ChIP-seq
1
ATAC-seq
Assay category
9
DNA accessibility
3
DNA binding
Target of assay
3
control
Date released
8
January, 2021
January, 2019
3
November, 2018
1
January, 2018
Available data
42
bam
42
fastq
40
bigWig
bed narrowPeak
39
bigBed narrowPeak
Organism
12
Homo sapiens
Biosample type
8
primary cell
4
cell line
Organ
pancreas
343
liver
341
epithelium
163
kidney
155
connective tissue
148
heart
92
adipose tissue
83
brain
49
vasculature
47
blood vessel
36
musculature of body
30
limb
28
eye
23
embryo
20
lung
16
nerve
13
artery
12
blood
12
bodily fluid
10
spleen
9
bone element
9
vein
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
8
T1D
4
AMP
Genome assembly (visualization)
1
hg19
Lab
8
Kyle Gaulton, UCSD
4
AMP-T2D consortium
files.file_type!
bed narrowPeak
month_released!
February, 2021
January, 2019
organ_slims!
pancreas
BIOSAMPLE
ASSAY
12 results
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snATAC-seq
ChIP-seq
ATAC-seq
primary cell
peripheral blood mononuclear cell
8
cell line
GM12878
3
1
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