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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 3016target gene predictions
  • 2638pQTL
  • 1225accessible chromatin
  • 944chromatin state
  • 872candidate regulatory elements
  • 508gene expression
  • 484differential activity
  • 177eQTL
  • 140variant allelic effects
  • 137histone modifications
  • 99binding sites
  • 74Fine-mapped variants
  • 25caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
Date released
  • 2636February, 2025
  • February, 2021
  • 2511September, 2022
  • 1984July, 2026
  • 389May, 2021
  • 373February, 2024
  • 333November, 2021
  • 320May, 2026
  • 289June, 2020
  • 286September, 2023
  • 155May, 2020
  • 128August, 2021
  • 128March, 2020
  • 106January, 2022
  • 101October, 2022
  • 89January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 21July, 2025
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 4March, 2026
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 5656bed bed3+
  • 3373tsv
  • 869bed bed9
  • 532bigWig
  • 40bigBed bed9
  • 34bed bed9+
  • 29txt
  • 26csv
  • 13bigBed narrowPeak
  • 12bed bed3
  • bed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 10313Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1458ENCODE-rE2G
  • 513AMP
  • 482DGA
  • 415T1D
  • 405T2DKP
  • 393HDMA
  • 320pyxis
  • 290ChIP-Atlas
  • 281KPMP
  • 219BLUEPRINT
  • 1744DN
  • 152 T2DKP
  • 149GTEx
  • 133CATlas
  • 128ENCODE
  • 111T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 67HPAP
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5310tissue
  • 3465primary cell
  • 1255cell line
  • 325in vitro differentiated cells
  • 4stem cell
Organ
  • 3295blood
  • 2853vasculature
  • 2825blood vessel
  • 2779bodily fluid
  • 2652vein
  • 793brain
  • 755epithelium
  • 568kidney
  • 440heart
  • 408connective tissue
  • 370lung
  • 290musculature of body
  • 288pancreas
  • 287intestine
  • 228skin of body
  • 214liver
  • 186limb
  • 180large intestine
  • 162embryo
  • 144eye
  • 141extraembryonic component
  • 119adipose tissue
  • 111muscle organ
  • 111stomach
  • 88adrenal gland
  • 83uterus
  • 82thymus
  • 79placenta
  • 79small intestine
  • 76mammary gland
  • 73artery
  • 70bone element
  • 60__MARKER__
  • 58prostate gland
  • 55ureter
  • 53spleen
  • 52gonad
  • 43thyroid gland
  • 40spinal cord
  • 38esophagus
  • 36penis
  • 35lymph node
  • 28ovary
  • 23testis
  • 22nerve
  • 19lymphoid tissue
  • 17mouth
  • 16lymphatic vessel
  • 15skeleton
  • 12breast
  • 12pituitary gland
  • 12urinary bladder
  • 11bronchus
  • 10tongue
  • 10vagina
  • 8bone marrow
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
  • 1trachea
Project
  • 9646AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 4590hg19
  • 3882GRCh38
  • 4hg18
files.file_type!
  • bed narrowPeak
month_released!
  • February, 2021
BIOSAMPLE
TYPE

10361 results

search-icontable-tab-icon
Clear Filters
target gene predictions
pQTL
accessible chromatin
chromatin state
candidate regulatory elements
gene expression
differential activity
eQTL
variant allelic effects
histone modifications
binding sites
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
tissue
whole blood26351
heart3852119312
head of caudate nucleus86
stomach423191911
brain3021816121
primary cell
monocyte218154484121
fibroblast2840310261
endothelial cell17233525223
macrophage13213217832
CD8-positive, alpha-beta T cell2741330
cell line
A54933118181
HeLa-S359331
H1-hESC3911181
K562301761
MCF-7131551
in vitro differentiated cells
neural progenitor cell61044714
hematopoietic multipotent progenitor cell22110101
adipocyte7462
embryonic stem cell165
progenitor cell of endocrine pancreas19
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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