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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
snATAC-seq
6
ChIP-seq
1
ATAC-seq
Assay category
9
DNA accessibility
6
DNA binding
Target of assay
6
control
Date released
8
January, 2021
3
January, 2019
3
November, 2018
1
January, 2018
Available data
60
bam
60
fastq
55
bigWig
bed narrowPeak
54
bigBed narrowPeak
Organism
15
Homo sapiens
Biosample type
8
primary cell
7
cell line
Organ
721
pancreas
607
connective tissue
477
adipose tissue
368
epithelium
347
liver
heart
169
kidney
151
bone element
99
vasculature
97
blood vessel
81
brain
67
artery
31
musculature of body
30
limb
28
eye
23
embryo
19
lung
16
nerve
15
blood
15
bodily fluid
10
spleen
8
skeleton
8
vein
4
gonad
4
ovary
2
pericardium
1
bone marrow
1
lymph node
1
pituitary gland
1
skin of body
1
spinal cord
1
thymus
Project
8
T1D
7
AMP
Genome assembly (visualization)
1
hg19
Lab
8
Kyle Gaulton, UCSD
7
AMP-T2D consortium
files.file_type!
bed narrowPeak
month_released!
March, 2020
organ_slims!
heart
BIOSAMPLE
ASSAY
15 results
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snATAC-seq
ChIP-seq
ATAC-seq
primary cell
peripheral blood mononuclear cell
8
cell line
GM12878
6
1
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