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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2638pQTL
  • 1709candidate regulatory elements
  • 1313target gene predictions
  • 977histone modifications
  • 944chromatin state
  • 913accessible chromatin
  • 816binding sites
  • 674gene expression
  • 180eQTL
  • 164differential activity
  • 141variant allelic effects
  • 25caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 2Fine-mapped variants
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2590February, 2021
  • 2511September, 2022
  • 389May, 2021
  • 373February, 2024
  • 333November, 2021
  • 289June, 2020
  • 286September, 2023
  • 155May, 2020
  • 128August, 2021
  • March, 2020
  • 106January, 2022
  • 101October, 2022
  • 89January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 21July, 2025
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 4March, 2026
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 6039bed bed3+
  • 3472tsv
  • 869bed bed9
  • 546bigWig
  • 112txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 12bed bed3
  • bed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 10471Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1848ChIP-Atlas
  • 964ENCODE
  • 595DGA
  • 532AMP
  • 421T1D
  • 406T2DKP
  • 281KPMP
  • 219BLUEPRINT
  • 1744DN
  • 146 T2DKP
  • 111T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 79GTEx
  • 67HPAP
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5183tissue
  • 2527primary cell
  • 2345cell line
  • 460in vitro differentiated cells
  • 2stem cell
Organ
  • 2893vasculature
  • 2853bodily fluid
  • 2842blood
  • 2828blood vessel
  • 2657vein
  • 954epithelium
  • 649kidney
  • 460connective tissue
  • 429brain
  • 373musculature of body
  • 310lung
  • 287intestine
  • 268pancreas
  • 244heart
  • 235limb
  • 214embryo
  • 204skin of body
  • 173large intestine
  • 147liver
  • 146extraembryonic component
  • 118stomach
  • 109eye
  • 89bone element
  • 87mammary gland
  • 83small intestine
  • 83uterus
  • 79adipose tissue
  • 78prostate gland
  • 73placenta
  • 72adrenal gland
  • 69artery
  • 64penis
  • 64ureter
  • 62lymph node
  • 49gonad
  • 48thymus
  • 44esophagus
  • 40spinal cord
  • 33spleen
  • 26testis
  • 24lymphatic vessel
  • 24lymphoid tissue
  • 23thyroid gland
  • 22nerve
  • 22ovary
  • 19mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 13breast
  • 13pituitary gland
  • 10tongue
  • 10vagina
  • 9urinary bladder
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 9804AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 6885hg19
  • 1837GRCh38
  • 4hg18
files.file_type!
  • bed narrowPeak
month_released!
  • March, 2020
BIOSAMPLE
TYPE

10519 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
chromatin state
accessible chromatin
binding sites
gene expression
eQTL
differential activity
variant allelic effects
caQTL
sQTL
hQTL
variant to gene
meQTL
other
Fine-mapped variants
representative DNase hypersensitivity sites
tissue
whole blood26351
heart371912151412
stomach4021119311
kidney2914216101711
brain291631821121
primary cell
monocyte286181154121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell7530143
endothelial cell3711529223
B cell1710862
cell line
HeLa-S355531
A549211911812
H1-hESC13911128
K5627231712
MCF-7962513
in vitro differentiated cells
neural progenitor cell54154107
hematopoietic multipotent progenitor cell1910110111
adipocyte4616411
embryonic stem cell1561
cardiomyocytes11
stem cell
H1-hESC1
undifferentiated ESC (H9 cell line)1
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