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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 164ChIP-seq
  • 89total RNA-seq
  • 9WGBS
  • 6RRBS
  • 1DNase-seq
Assay category
  • 164DNA binding
  • 89Transcription
  • 15DNA methylation
  • 1DNA accessibility
Target of assay
  • 91histone
  • 91histone modification
  • 53broad histone mark
  • 50control
  • 38narrow histone mark
  • 23transcription factor
  • 1RNA binding protein
Date released
  • 692February, 2021
  • 314May, 2020
  • 269August, 2017
  • 266May, 2021
  • 213August, 2021
  • 168July, 2018
  • 162May, 2022
  • 140February, 2023
  • 125October, 2019
  • 101July, 2019
  • 93November, 2017
  • 61March, 2020
  • 59September, 2020
  • 49April, 2018
  • 47September, 2023
  • 31October, 2018
  • 27September, 2018
  • 25February, 2020
  • 24November, 2019
  • 23February, 2018
  • 23May, 2019
  • 22December, 2017
  • 19April, 2020
  • 16January, 2021
  • 15April, 2019
  • 15May, 2023
  • 15November, 2018
  • 14November, 2020
  • 11October, 2017
  • 10December, 2019
  • 9January, 2019
  • 8January, 2018
  • 8June, 2019
  • 7August, 2020
  • 6September, 2017
  • 5December, 2018
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
Available data
  • 287fastq
  • 282bam
  • 272bigWig
  • bed narrowPeak
  • 89tsv
  • 85tagAlign
  • 42bigBed narrowPeak
  • 41bed broadPeak
  • 33bed bed3+
  • 15bigBed broadPeak
  • 6bed bedMethyl
  • 6bigBed bedMethyl
Organism
  • 268Homo sapiens
Biosample type
  • 218tissue
  • 26primary cell
  • 25in vitro differentiated cells
Organ
  • 139pancreas
  • 79connective tissue
  • 54adipose tissue
  • 36liver
  • 13musculature of body
  • 12epithelium
Project
  • 269AMP
Genome assembly (visualization)
  • 134hg19
  • 131GRCh38
Lab
  • 269AMP-T2D consortium
Audit category:
  • 38missing controlled_by
files.file_type!
  • bed narrowPeak
BIOSAMPLE
ASSAY

269 results

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Clear Filters
ChIP-seq
total RNA-seq
WGBS
RRBS
DNase-seq
tissue
islet of Langerhans2489
subcutaneous abdominal adipose tissue353
liver3131
skeletal muscle tissue94
white adipose tissue12
primary cell
pancreatic endocrine cell12
pancreatic alpha cell6
pancreatic beta cell6
skeletal muscle myoblast11
in vitro differentiated cells
adipocyte25
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