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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
ChIP-seq
2
ATAC-seq
Assay category
31
DNA binding
2
DNA accessibility
Target of assay
24
control
7
histone
7
histone modification
5
broad histone mark
2
narrow histone mark
Date released
692
February, 2021
314
May, 2020
269
August, 2017
266
May, 2021
213
August, 2021
168
July, 2018
162
May, 2022
140
February, 2023
125
October, 2019
101
July, 2019
93
November, 2017
61
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
31
October, 2018
27
September, 2018
25
February, 2020
24
November, 2019
23
February, 2018
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
15
November, 2018
14
November, 2020
11
October, 2017
10
December, 2019
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
111
fastq
109
bam
86
bigWig
bed narrowPeak
56
bigBed narrowPeak
15
bed bed3+
14
tagAlign
4
bed broadPeak
Organism
33
Homo sapiens
Biosample type
23
tissue
9
in vitro differentiated cells
1
stem cell
Organ
13
liver
10
brain
5
embryo
3
epithelium
1
pancreas
Project
33
AMP
Genome assembly (visualization)
7
GRCh38
6
hg19
Lab
32
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
2
inconsistent ontology term
Audit category:
2
missing controlled_by
files.file_type!
bed narrowPeak
month_released!
January, 2019
BIOSAMPLE
ASSAY
33 results
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Clear Filters
ChIP-seq
ATAC-seq
tissue
brain
9
liver
9
right lobe of liver
3
cerebellum (Hemisphere)
1
islet of Langerhans
1
in vitro differentiated cells
pancreatic endoderm
3
Hepatic endoderm
2
Posterior foregut
1
definitive endodermal cell
1
hepatocyte
1
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stem cell
hESC
1
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