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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
single cell RNA-seq
23
total RNA-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
Hi-C
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
74
Transcription
1
3D chromatin structure
Date released
692
February, 2021
314
May, 2020
266
May, 2021
256
August, 2017
213
August, 2021
168
July, 2018
160
May, 2022
140
February, 2023
125
October, 2019
93
November, 2017
91
July, 2019
59
September, 2020
56
March, 2020
49
April, 2018
47
September, 2023
31
October, 2018
27
September, 2018
24
November, 2019
23
February, 2018
23
February, 2020
22
December, 2017
22
May, 2019
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
15
November, 2018
14
November, 2020
11
October, 2017
10
December, 2019
9
January, 2019
7
August, 2020
7
January, 2018
6
June, 2019
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
23
tsv
1
hic
Organism
71
Homo sapiens
Biosample type
70
tissue
2
cell line
2
stem cell
1
primary cell
Organ
47
kidney
12
brain
3
blood vessel
3
heart
3
limb
3
vasculature
2
adipose tissue
2
artery
2
connective tissue
musculature of body
1
eye
1
liver
1
nerve
1
pancreas
1
spinal cord
Project
47
KPMP
23
AMP
4
community
1
ITG
Genome assembly (visualization)
1
GRCh38
Lab
47
KPMP
23
AMP-T2D consortium
4
Anna Gloyn, Oxford
1
ITG
Audit category:
1
inconsistent ontology term
files.file_type!
bed narrowPeak
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
75 results
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Clear Filters
single cell RNA-seq
total RNA-seq
CRISPR RNA-seq
CRISPRi RNA-seq
Hi-C
shRNA RNA-seq
siRNA RNA-seq
tissue
kidney
47
Ammon's horn
1
C1 segment of cervical spinal cord
1
amygdala
1
anterior cingulate cortex
1
+ See 19 more…
cell line
EndoC-BH1
1
1
stem cell
SB Ad3.1
1
1
primary cell
chondrocytes
1
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