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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 182total RNA-seq
  • 45ChIP-seq
  • 21ATAC-seq
  • 17pCHi-C
  • 1DNAme array
Assay category
  • 182Transcription
  • 45DNA binding
  • 21DNA accessibility
  • 1DNA methylation
Target of assay
  • 24histone
  • 24histone modification
  • 12broad histone mark
  • 12narrow histone mark
  • 12transcription factor
  • 9control
  • 5RNA binding protein
Date released
  • 692February, 2021
  • 314May, 2020
  • 269August, 2017
  • 266May, 2021
  • 213August, 2021
  • 168July, 2018
  • 162May, 2022
  • 140February, 2023
  • 125October, 2019
  • 101July, 2019
  • 93November, 2017
  • 61March, 2020
  • 59September, 2020
  • 49April, 2018
  • 47September, 2023
  • 31October, 2018
  • 27September, 2018
  • 25February, 2020
  • 24November, 2019
  • 23February, 2018
  • 23May, 2019
  • 22December, 2017
  • 19April, 2020
  • 16January, 2021
  • 15April, 2019
  • 15May, 2023
  • 15November, 2018
  • 14November, 2020
  • 11October, 2017
  • 10December, 2019
  • 9January, 2019
  • 8January, 2018
  • 8June, 2019
  • 7August, 2020
  • 6September, 2017
  • 5December, 2018
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
  • 1July, 2025
Available data
  • 303bigWig
  • 277bam
  • 173tsv
  • bed narrowPeak
  • 90tagAlign
  • 2bed bed3+
Organism
  • 266Homo sapiens
Biosample type
  • 127in vitro differentiated cells
  • 79primary cell
  • 40tissue
  • 20cell line
Organ
  • 58pancreas
  • 23epithelium
  • 3heart
  • 2connective tissue
  • 2embryo
  • 1bone element
  • 1bone marrow
  • 1thymus
Project
  • 198AMP
  • 68T1D
Genome assembly (visualization)
  • 183hg19
  • 173GRCh38
Lab
  • 145AMP-T2D consortium
  • 121Kyle Gaulton, UCSD
Audit category:
  • 86inconsistent ontology term
files.file_type!
  • bed narrowPeak
BIOSAMPLE
ASSAY

266 results

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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
pCHi-C
DNAme array
in vitro differentiated cells
cardiomyocytes59
embryonic stem cell5375
induced pluripotent stem cell9
cardiac fibroblast1
cardiomyocytes (cardiac muscle cell)1
endothelial cell1
hematopoietic multipotent progenitor cell1
intermediate cardiomyocytes1
intermediate endothelial cell1
intermediate smooth muscle cell1
mesodermal cell (lineage marker-negative)1
mesodermal cell (pacemaker intermediate)1
pancreatic PP cell1
smooth muscle cell1
stem cell1
primary cell
monocyte52111
CD8-positive, alpha-beta T cell231
naive thymus-derived CD4-positive, alpha-beta T cell21
CD4-positive, alpha-beta T cell2
neutrophil11
B cell1
activated CD4-positive, alpha-beta T cell1
adult endothelial progenitor cell1
alternatively activated macrophage1
embryonic stem cell1
erythroblast1
inflammatory macrophage1
macrophage1
megakaryocyte1
naive B cel1
naive thymus-derived CD8-positive, alpha-beta T cell1
tissue
islet of Langerhans36
cardiac atrium1
cardiac ventricle1
pancreas1
thymus1
cell line
EndoC_BH1416
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