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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 41WGBS
  • 39ATAC-seq
  • 34single cell RNA-seq
  • 26total RNA-seq
  • 22snATAC-seq
Assay category
  • 61DNA accessibility
  • 60Transcription
  • 41DNA methylation
Date released
  • 692February, 2021
  • 314May, 2020
  • 269August, 2017
  • 266May, 2021
  • 213August, 2021
  • 168July, 2018
  • 162May, 2022
  • 140February, 2023
  • 125October, 2019
  • 101July, 2019
  • 93November, 2017
  • 61March, 2020
  • 59September, 2020
  • 49April, 2018
  • 47September, 2023
  • 31October, 2018
  • 27September, 2018
  • 25February, 2020
  • 24November, 2019
  • 23February, 2018
  • 23May, 2019
  • 22December, 2017
  • 19April, 2020
  • 16January, 2021
  • 15April, 2019
  • 15May, 2023
  • 15November, 2018
  • 14November, 2020
  • 11October, 2017
  • 10December, 2019
  • 9January, 2019
  • 8January, 2018
  • 8June, 2019
  • 7August, 2020
  • 6September, 2017
  • 5December, 2018
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
Available data
  • 134zippedFastqFolder
  • bed narrowPeak
  • 24bam
  • 24fastq
  • 20bigWig
  • 7txt
  • 1bed bed3+
Organism
  • 162Homo sapiens
Biosample type
  • 134primary cell
  • 28tissue
Organ
  • 86pancreas
  • 80epithelium
  • 20liver
  • 2musculature of body
Project
  • 134HPAP
  • 28AMP
Genome assembly (visualization)
  • 1hg19
Lab
  • 134Klaus Kaestner, Upenn
  • 20Karen Mohlke, UNC
  • 6Kyle Gaulton, UCSD
  • 2AMP-T2D consortium
Audit category:
  • 1audit script error
files.file_type!
  • bed narrowPeak
BIOSAMPLE
ASSAY

162 results

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Clear Filters
WGBS
ATAC-seq
single cell RNA-seq
total RNA-seq
snATAC-seq
primary cell
Langerhans cell3321
pancreatic alpha cell2522
pancreatic beta cell1613
pancreatic acinar cell4
tissue
liver20
islet of Langerhans6
skeletal muscle tissue11
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