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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
2
single cell RNA-seq
1
ATAC-seq
Assay category
58
Transcription
1
DNA accessibility
Target of assay
control
Date released
52
February, 2021
2
August, 2021
2
February, 2020
2
July, 2019
1
October, 2019
Available data
94
bam
86
bigWig
bed narrowPeak
58
tsv
25
bigBed narrowPeak
5
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
59
Homo sapiens
Biosample type
52
cell line
5
tissue
2
primary cell
Organ
679
pancreas
574
connective tissue
454
adipose tissue
343
epithelium
242
liver
182
heart
159
kidney
151
bone element
81
vasculature
80
blood vessel
58
artery
52
brain
30
musculature of body
27
eye
20
lung
16
embryo
13
limb
9
blood
9
bodily fluid
8
skeleton
7
vein
5
gonad
5
nerve
5
ovary
3
spleen
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
59
AMP
Genome assembly (visualization)
54
GRCh38
54
hg19
Lab
59
AMP-T2D consortium
files.file_type!
bed narrowPeak
organ_slims!
esophagus
target.investigated_as!
control
BIOSAMPLE
ASSAY
59 results
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total RNA-seq
single cell RNA-seq
ATAC-seq
cell line
smooth muscle cell of the coronary artery
52
tissue
pulmonary artery
2
coronary artery
1
islet of Langerhans
1
tibial artery
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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