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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
total RNA-seq
7
ChIP-seq
1
GRO-seq
Assay category
14
Transcription
7
DNA binding
Target of assay
7
control
histone
1
histone modification
1
narrow histone mark
Date released
8
August, 2021
7
February, 2018
4
December, 2017
2
May, 2021
1
January, 2018
Available data
24
bam
18
bigWig
15
fastq
14
tsv
bed narrowPeak
1
bed bed3+
Organism
22
Homo sapiens
Biosample type
14
in vitro differentiated cells
8
cell line
Organ
708
pancreas
566
connective tissue
448
adipose tissue
368
epithelium
liver
202
heart
171
kidney
151
bone element
98
vasculature
96
blood vessel
67
artery
63
brain
30
musculature of body
29
limb
26
eye
22
embryo
20
lung
16
nerve
15
blood
15
bodily fluid
11
spleen
8
skeleton
4
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
22
AMP
Genome assembly (visualization)
15
GRCh38
15
hg19
1
hg18
Lab
22
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
files.file_type!
bed narrowPeak
organ_slims!
liver
target.investigated_as!
histone
BIOSAMPLE
ASSAY
22 results
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Clear Filters
total RNA-seq
ChIP-seq
GRO-seq
in vitro differentiated cells
pancreatic endoderm
4
5
1
Hepatic endoderm
2
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
cell line
H1-hESC
8
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