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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 19total RNA-seq
  • 4pCHi-C
  • 3ChIP-seq
  • 1ATAC-seq
  • 1RRBS
Assay category
  • 19Transcription
  • 3DNA binding
  • 1DNA accessibility
  • 1DNA methylation
Target of assay
  • 2histone
  • 2histone modification
  • 2narrow histone mark
  • 1control
Date released
  • 21October, 2019
  • 4February, 2023
  • 1February, 2020
  • 1July, 2019
  • 1June, 2019
Available data
  • bed narrowPeak
  • 7bam
  • 6bigBed narrowPeak
  • 6bigWig
  • 5tsv
  • 4bed bed3+
  • 4bed broadPeak
  • 4bigBed broadPeak
  • 1bed bedMethyl
  • 1bigBed bedMethyl
Organism
  • 28Homo sapiens
Biosample type
  • 26tissue
  • 2primary cell
Organ
  • 732pancreas
  • 609connective tissue
  • 478adipose tissue
  • 373epithelium
  • 350liver
  • 202heart
  • 171kidney
  • 151bone element
  • 103vasculature
  • 101blood vessel
  • 83brain
  • 67artery
  • 37musculature of body
  • 30limb
  • 28eye
  • 23embryo
  • 20lung
  • 16nerve
  • 15blood
  • 15bodily fluid
  • 11spleen
  • 9vein
  • 8skeleton
  • 5gonad
  • 5ovary
  • 2intestine
  • 2pericardium
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1pituitary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 28AMP
Genome assembly (visualization)
  • 1hg19
Lab
  • 28AMP-T2D consortium
files.file_type!
  • bed narrowPeak
BIOSAMPLE
ASSAY

28 results

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Clear Filters
total RNA-seq
pCHi-C
ChIP-seq
ATAC-seq
RRBS
tissue
islet of Langerhans14421
retina3
pigmented layer of retina2
primary cell
retinal pigment epithelial cell11
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