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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 93single cell RNA-seq
  • 72total RNA-seq
  • 20ChIP-seq
  • 8WGBS
  • 3Hi-C
  • 3pCHi-C
  • 2RRBS
  • 1small RNA-seq
Assay category
  • 166Transcription
  • 20DNA binding
  • 10DNA methylation
  • 33D chromatin structure
Target of assay
  • 20control
Date released
  • 92August, 2021
  • 54February, 2021
  • 21July, 2019
  • 10April, 2019
  • 7March, 2020
  • 6May, 2019
  • 3February, 2020
  • 3May, 2021
  • 3October, 2019
  • 2June, 2019
  • 1February, 2023
Available data
  • 224bigWig
  • 211bam
  • bed narrowPeak
  • 168tsv
  • 94bigBed narrowPeak
  • 30bed bed3+
  • 30bed broadPeak
  • 30bigBed broadPeak
  • 8bed bedMethyl
  • 8bigBed bedMethyl
  • 6tagAlign
  • 3bedpe bed3+
  • 3hic
Organism
  • 202Homo sapiens
Biosample type
  • 140tissue
  • 54cell line
  • 7primary cell
  • 1in vitro differentiated cells
Organ
  • 732pancreas
  • 609connective tissue
  • 478adipose tissue
  • 373epithelium
  • 350liver
  • 202heart
  • 171kidney
  • 151bone element
  • 103vasculature
  • 101blood vessel
  • 83brain
  • 67artery
  • 36musculature of body
  • 30limb
  • 28eye
  • 23embryo
  • 20lung
  • 16nerve
  • 15blood
  • 15bodily fluid
  • 11spleen
  • 9vein
  • 8skeleton
  • 5gonad
  • 5ovary
  • 2intestine
  • 2pericardium
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1pituitary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 202AMP
Genome assembly (visualization)
  • 76GRCh38
  • 75hg19
Lab
  • 202AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
files.file_type!
  • bed narrowPeak
BIOSAMPLE
ASSAY

202 results

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Clear Filters
single cell RNA-seq
total RNA-seq
ChIP-seq
WGBS
Hi-C
pCHi-C
RRBS
small RNA-seq
tissue
heart left ventricle18364111
heart right ventricle1712211
right cardiac atrium18111
left cardiac atrium18
heart142111
cell line
smooth muscle cell of the coronary artery522
primary cell
cardiac fibroblast21
cardiac atrium fibroblast1
cardiac ventricle fibroblast1
endothelial cell of coronary artery1
smooth muscle cell of the coronary artery1
in vitro differentiated cells
cardiac fibroblast1
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