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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
total RNA-seq
4
Hi-C
1
ChIP-seq
1
WGBS
Assay category
7
Transcription
4
3D chromatin structure
1
DNA binding
1
DNA methylation
Target of assay
control
1
histone
1
histone modification
1
narrow histone mark
Date released
5
July, 2019
5
October, 2019
3
February, 2020
Available data
97
bam
bed narrowPeak
91
bigWig
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
13
Homo sapiens
Biosample type
13
tissue
Organ
679
pancreas
574
connective tissue
454
adipose tissue
343
epithelium
242
liver
182
heart
159
kidney
151
bone element
81
vasculature
80
blood vessel
58
artery
52
brain
30
musculature of body
27
eye
20
lung
16
embryo
13
limb
9
blood
9
bodily fluid
8
skeleton
7
vein
5
gonad
5
nerve
5
ovary
3
spleen
2
intestine
2
pericardium
2
thymus
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
13
AMP
Genome assembly (visualization)
5
GRCh38
4
hg19
Lab
13
AMP-T2D consortium
files.file_type!
bed narrowPeak
organ_slims!
adrenal gland
mammary gland
target.investigated_as!
control
BIOSAMPLE
ASSAY
13 results
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Clear Filters
total RNA-seq
Hi-C
ChIP-seq
WGBS
tissue
gastrocnemius medialis
1
4
tibial nerve
5
islet of Langerhans
1
muscle of leg
1
tibial artery
1
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