Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ChIP-seq
3
pCHi-C
2
Hi-C
Assay category
8
DNA binding
2
3D chromatin structure
Target of assay
6
histone
6
histone modification
4
broad histone mark
2
control
2
narrow histone mark
Date released
9
October, 2019
3
March, 2020
1
May, 2021
Available data
20
bam
15
bigWig
bed narrowPeak
13
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
2
bed bed3+
2
hic
2
tsv
1
bedpe bed3+
1
tar
Organism
13
Homo sapiens
Biosample type
9
primary cell
4
tissue
Organ
732
pancreas
609
connective tissue
478
adipose tissue
373
epithelium
350
liver
202
heart
171
kidney
151
bone element
103
vasculature
101
blood vessel
83
brain
67
artery
36
musculature of body
30
limb
28
eye
23
embryo
20
lung
16
nerve
15
blood
15
bodily fluid
11
spleen
9
vein
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
12
AMP
1
T1D
Genome assembly (visualization)
4
hg19
Lab
12
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
1
audit script error
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
13 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
pCHi-C
Hi-C
primary cell
endothelial cell of umbilical vein
7
2
tissue
thymus
2
islet of Langerhans
1
small intestine
1
Download