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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 3018target gene predictions
  • 2638pQTL
  • 1236accessible chromatin
  • 977histone modifications
  • 944chromatin state
  • 871candidate regulatory elements
  • 817binding sites
  • 685gene expression
  • 484differential activity
  • 180eQTL
  • 141variant allelic effects
  • 74Fine-mapped variants
  • 25caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2511September, 2022
  • 1984July, 2026
  • 1753February, 2021
  • 389May, 2021
  • 372February, 2024
  • 333November, 2021
  • 320May, 2026
  • 289June, 2020
  • 286September, 2023
  • 155May, 2020
  • 128August, 2021
  • 128March, 2020
  • 106January, 2022
  • 101October, 2022
  • 89January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 21July, 2025
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 4March, 2026
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 7230bed bed3+
  • 3551tsv
  • 869bed bed9
  • 546bigWig
  • 112txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 12bed bed3
  • bed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 12065Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1848ChIP-Atlas
  • 1458ENCODE-rE2G
  • 646DGA
  • 534AMP
  • 421T1D
  • 406T2DKP
  • 393HDMA
  • 320pyxis
  • 281KPMP
  • 219BLUEPRINT
  • 174 T2DKP
  • 1744DN
  • 151GTEx
  • 133CATlas
  • 128ENCODE
  • 111T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 67HPAP
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5473tissue
  • 3753primary cell
  • 2411cell line
  • 470in vitro differentiated cells
  • 4stem cell
Organ
  • 3345blood
  • 2876vasculature
  • 2841blood vessel
  • 2831bodily fluid
  • 2655vein
  • 899epithelium
  • 852brain
  • 672kidney
  • 477connective tissue
  • 454heart
  • 379lung
  • 308pancreas
  • 304musculature of body
  • 300intestine
  • 255skin of body
  • 231liver
  • 196limb
  • 190large intestine
  • 185embryo
  • 152eye
  • 148extraembryonic component
  • 131adipose tissue
  • 112stomach
  • 111muscle organ
  • 95bone element
  • 90mammary gland
  • 88adrenal gland
  • 88uterus
  • 84artery
  • 84placenta
  • 84thymus
  • 79small intestine
  • 73prostate gland
  • 60__MARKER__
  • 55gonad
  • 55ureter
  • 54spleen
  • 49lymph node
  • 46penis
  • 43thyroid gland
  • 41spinal cord
  • 38esophagus
  • 28ovary
  • 26testis
  • 23skeleton
  • 22nerve
  • 20lymphoid tissue
  • 19lymphatic vessel
  • 17mouth
  • 14bronchus
  • 13pituitary gland
  • 12bone marrow
  • 12breast
  • 12urinary bladder
  • 10tongue
  • 10vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 11398AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 6164hg19
  • 3893GRCh38
  • 4hg18
files.file_type!
  • bed narrowPeak
software_used.software.name!
  • encode-ccres
BIOSAMPLE
TYPE

12113 results

search-icontable-tab-icon
Clear Filters
target gene predictions
pQTL
accessible chromatin
histone modifications
chromatin state
candidate regulatory elements
binding sites
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart385121191412
head of caudate nucleus86
stomach4231191911
kidney2810216141711
primary cell
monocyte2188611544121
fibroblast2840311026
endothelial cell1723132925223
macrophage13213217832
CD8-positive, alpha-beta T cell2743013
cell line
A549331118182
HeLa-S359331
H1-hESC39111128
K5623011762
MCF-71312553
in vitro differentiated cells
hematopoietic multipotent progenitor cell2211101011
neural progenitor cell61015447
adipocyte7416211
embryonic stem cell16151
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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