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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 81ChIP-seq
Assay category
  • 81DNA binding
Target of assay
  • 343control
  • 166histone
  • 166histone modification
  • 85narrow histone mark
  • 81broad histone mark
  • 45transcription factor
  • 9RNA binding protein
  • 5nucleotide modification
  • 1recombinant protein
Date released
  • 53August, 2017
  • 12May, 2021
  • 5November, 2017
  • 5October, 2017
  • 5October, 2019
  • 1August, 2021
Available data
  • 427bigWig
  • bed narrowPeak
  • 378bam
  • 242bigBed narrowPeak
  • 147tagAlign
  • 118fastq
  • 36bed broadPeak
  • 16bigBed broadPeak
  • 12bed bed3+
Organism
  • 81Homo sapiens
Biosample type
  • 50tissue
  • 19in vitro differentiated cells
  • 10primary cell
  • 2cell line
Organ
  • 28connective tissue
  • 20adipose tissue
  • 13liver
  • 10pancreas
  • 9brain
  • 4blood vessel
  • 4epithelium
  • 4musculature of body
  • 4vasculature
  • 4vein
Project
  • 81AMP
Genome assembly (visualization)
  • 8hg19
  • 5GRCh38
Lab
  • 71AMP-T2D consortium
  • 10Kyle Gaulton, UCSD
Audit category:
  • 6missing controlled_by
Audit category:
  • 1inconsistent control read length
files.file_type!
  • bed narrowPeak
BIOSAMPLE
ASSAY

81 results

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Clear Filters
ChIP-seq
tissue
subcutaneous abdominal adipose tissue20
liver12
brain5
islet of Langerhans5
skeletal muscle tissue4
in vitro differentiated cells
embryonic stem cell10
adipocyte8
neural progenitor cell1
primary cell
endothelial cell of umbilical vein4
pancreatic endocrine cell4
naive thymus-derived CD4-positive, alpha-beta T cell1
neutrophil1
cell line
HepG21
Panc11
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