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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 166ChIP-seq
Assay category
  • 166DNA binding
Target of assay
  • 343control
  • 166histone
  • 166histone modification
  • 85narrow histone mark
  • 81broad histone mark
  • 45transcription factor
  • 9RNA binding protein
  • 5nucleotide modification
  • 1recombinant protein
Date released
  • 91August, 2017
  • 29October, 2019
  • 24May, 2021
  • 14November, 2017
  • 6October, 2017
  • 1August, 2021
  • 1December, 2017
Available data
  • 869bigWig
  • bed narrowPeak
  • 785bam
  • 391bigBed narrowPeak
  • 321tagAlign
  • 230fastq
  • 65bed broadPeak
  • 30bigBed broadPeak
  • 25bed bed3+
  • 1tagAlign bed3+
Organism
  • 166Homo sapiens
Biosample type
  • 108tissue
  • 34in vitro differentiated cells
  • 21primary cell
  • 3cell line
Organ
  • 43connective tissue
  • 30adipose tissue
  • 24pancreas
  • 22liver
  • 20brain
  • 6musculature of body
  • 5blood vessel
  • 5epithelium
  • 5vasculature
  • 5vein
  • 4gonad
  • 4ovary
  • 2eye
  • 1embryo
  • 1limb
  • 1lymph node
Project
  • 166AMP
Genome assembly (visualization)
  • 21hg19
  • 17GRCh38
Lab
  • 146AMP-T2D consortium
  • 20Kyle Gaulton, UCSD
Audit category:
  • 17missing controlled_by
Audit category:
  • 2inconsistent control read length
files.file_type!
  • bed narrowPeak
BIOSAMPLE
ASSAY

166 results

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Clear Filters
ChIP-seq
tissue
islet of Langerhans32
subcutaneous abdominal adipose tissue30
liver20
brain6
skeletal muscle tissue6
in vitro differentiated cells
embryonic stem cell20
adipocyte12
neural progenitor cell1
pancreatic endoderm1
primary cell
pancreatic endocrine cell12
endothelial cell of umbilical vein5
naive thymus-derived CD4-positive, alpha-beta T cell2
monocyte1
neutrophil1
cell line
HepG22
Panc11
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