Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 45ChIP-seq
Assay category
  • 45DNA binding
Target of assay
  • 343control
  • 166histone
  • 166histone modification
  • 85narrow histone mark
  • 81broad histone mark
  • 45transcription factor
  • 9RNA binding protein
  • 5nucleotide modification
  • 1recombinant protein
Date released
  • 23August, 2017
  • 12May, 2021
  • 8November, 2017
  • 1April, 2019
  • 1November, 2018
Available data
  • 496bigWig
  • 485bam
  • bed narrowPeak
  • 454fastq
  • 405bigBed narrowPeak
  • 49bed broadPeak
  • 49bigBed broadPeak
  • 19bed bed3+
  • 9tagAlign
  • 3tar
Organism
  • 45Homo sapiens
Biosample type
  • 19tissue
  • 17in vitro differentiated cells
  • 9cell line
Organ
  • 17connective tissue
  • 12adipose tissue
  • 9liver
  • 6pancreas
  • 1kidney
Project
  • 45AMP
Genome assembly (visualization)
  • 27hg19
  • 23GRCh38
Lab
  • 33AMP-T2D consortium
  • 12Kyle Gaulton, UCSD
Audit category:
  • 24missing controlled_by
files.file_type!
  • bed narrowPeak
BIOSAMPLE
ASSAY

45 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
tissue
white adipose tissue12
islet of Langerhans6
kidney1
in vitro differentiated cells
embryonic stem cell12
adipocyte5
cell line
HepG29
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego