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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
ATAC-seq
13
ChIP-seq
2
single cell RNA-seq
2
total RNA-seq
1
pCHi-C
Assay category
44
DNA accessibility
13
DNA binding
4
Transcription
Target of assay
9
control
4
histone
4
histone modification
4
narrow histone mark
Date released
35
February, 2023
10
February, 2021
10
October, 2019
2
August, 2021
2
February, 2020
2
May, 2019
1
March, 2020
Available data
103
bam
bigWig
75
bed narrowPeak
59
tsv
25
bigBed narrowPeak
7
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
62
Homo sapiens
Biosample type
52
tissue
10
cell line
Organ
322
pancreas
223
epithelium
223
kidney
169
heart
169
liver
114
connective tissue
101
bone element
81
vasculature
80
blood vessel
66
adipose tissue
64
brain
56
artery
55
eye
31
limb
28
musculature of body
20
lung
16
skeleton
14
blood
14
bodily fluid
12
nerve
9
spleen
8
embryo
7
vein
5
gonad
5
ovary
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
62
AMP
Genome assembly (visualization)
43
GRCh38
8
hg19
Lab
62
AMP-T2D consortium
files.file_type!
bedpe
bigWig
BIOSAMPLE
ASSAY
62 results
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ATAC-seq
ChIP-seq
single cell RNA-seq
total RNA-seq
pCHi-C
tissue
coronary artery
35
2
1
tibial artery
5
1
islet of Langerhans
1
4
pulmonary artery
2
ovary
1
cell line
smooth muscle cell of the coronary artery
8
2
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