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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
49
DNA binding
9
DNA accessibility
Target of assay
51
transcription factor
10
RNA binding protein
chromatin remodeller
6
control
1
histone
1
histone modification
narrow histone mark
Date released
25
December, 2018
13
November, 2018
11
January, 2019
8
January, 2021
1
January, 2018
Available data
49
bam
49
fastq
44
bigWig
43
bed narrowPeak
43
bigBed narrowPeak
Organism
58
Homo sapiens
Biosample type
50
cell line
8
primary cell
Organ
872
pancreas
liver
649
connective tissue
479
adipose tissue
474
epithelium
353
heart
339
kidney
210
vasculature
205
blood vessel
169
brain
159
bone element
135
artery
107
limb
83
musculature of body
58
blood
58
bodily fluid
58
eye
35
nerve
29
embryo
23
spleen
20
lung
18
ureter
16
skeleton
16
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
50
AMP
8
T1D
Genome assembly (visualization)
44
hg19
43
GRCh38
Lab
50
AMP-T2D consortium
8
Kyle Gaulton, UCSD
files.file_type!
bedpe
organ_slims!
liver
target.investigated_as!
chromatin remodeller
narrow histone mark
BIOSAMPLE
ASSAY
58 results
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ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
49
1
primary cell
peripheral blood mononuclear cell
8
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