Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
14
total RNA-seq
4
DNase-seq
4
pCHi-C
2
ChIP-seq
1
RRBS
Assay category
32
DNA accessibility
14
Transcription
2
DNA binding
1
DNA methylation
Target of assay
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
27
February, 2023
19
October, 2019
6
June, 2019
1
July, 2019
Available data
32
bed narrowPeak
6
bam
5
bigBed narrowPeak
5
bigWig
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
53
Homo sapiens
Biosample type
49
tissue
4
primary cell
Organ
510
liver
371
pancreas
300
kidney
270
epithelium
121
connective tissue
111
heart
81
vasculature
76
blood vessel
73
brain
68
blood
68
bodily fluid
60
limb
57
adipose tissue
53
eye
52
musculature of body
49
artery
19
lung
18
spleen
18
ureter
14
nerve
11
embryo
9
bone element
8
skeleton
6
vein
1
bone marrow
1
pericardium
1
pituitary gland
1
skin of body
1
thymus
Project
53
AMP
Genome assembly (visualization)
33
hg19
5
GRCh38
Lab
53
AMP-T2D consortium
files.file_type!
bedpe bed3+
tsv
month_released!
February, 2021
target.investigated_as!
histone
BIOSAMPLE
ASSAY
53 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
total RNA-seq
DNase-seq
pCHi-C
ChIP-seq
RRBS
tissue
islet of Langerhans
1
14
4
retina
15
3
pigmented layer of retina
12
primary cell
retinal pigment epithelial cell
1
2
1
Download