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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
213
accessible chromatin
125
target gene predictions
113
candidate regulatory elements
53
chromatin state
43
binding sites
41
variant allelic effects
28
histone modifications
19
gene expression
3
eQTL
2
caQTL
2
differential activity
Date released
157
September, 2022
127
November, 2021
112
February, 2021
61
February, 2024
26
June, 2020
20
January, 2021
17
May, 2021
15
May, 2020
15
November, 2022
12
January, 2020
11
August, 2021
11
February, 2023
10
May, 2024
9
February, 2020
7
April, 2020
7
March, 2020
6
August, 2018
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2023
2
May, 2022
1
November, 2019
Available data
564
bed bed3+
tsv
176
bigWig
78
txt
52
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
bigBed bed9
Organism
642
Homo sapiens
Biosample type
522
primary cell
68
tissue
34
cell line
18
in vitro differentiated cells
Organ
633
epithelium
401
connective tissue
399
kidney
393
brain
358
musculature of body
310
lung
286
intestine
223
limb
218
heart
217
bodily fluid
206
blood
205
embryo
202
skin of body
199
pancreas
197
vasculature
172
large intestine
149
blood vessel
146
extraembryonic component
129
liver
117
stomach
107
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adrenal gland
66
adipose tissue
64
penis
64
ureter
62
lymph node
57
artery
49
thymus
48
gonad
43
esophagus
38
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
20
vein
19
lymphatic vessel
18
mouth
18
nerve
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
486
AMP
127
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
617
hg19
235
GRCh38
files.file_type!
bigBed bed9
tsv
BIOSAMPLE
TYPE
642 results
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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
binding sites
variant allelic effects
histone modifications
gene expression
eQTL
caQTL
differential activity
primary cell
endothelial cell
15
7
3
2
2
1
1
1
2
hepatocyte
8
3
2
1
1
2
4
4
foreskin keratinocyte
4
11
4
endothelial cell of umbilical vein
2
4
6
3
2
1
keratinocyte
2
5
3
3
1
1
2
+ See 94 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
urinary bladder
1
2
3
2
kidney epithelium
1
1
+ See 15 more…
cell line
EndoC_BH1
8
1
1
2
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
mammary gland epithelial cell
1
1
1
dermis microvascular lymphatic vessel endothelial cell
1
1
See all biosamples
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