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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
139
candidate regulatory elements
108
target gene predictions
96
accessible chromatin
70
chromatin state
51
gene expression
31
binding sites
26
histone modifications
22
eQTL
18
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
189
September, 2022
138
February, 2021
59
November, 2021
23
June, 2020
20
February, 2024
18
May, 2021
17
September, 2023
12
October, 2022
11
August, 2021
10
January, 2020
10
March, 2020
10
May, 2020
10
May, 2024
9
February, 2020
7
August, 2017
7
January, 2022
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
October, 2019
Available data
431
bed bed3+
67
tsv
64
bed bed9
60
bigWig
7
txt
bigBed bed9
1
bigBed narrowPeak
Organism
585
Homo sapiens
Biosample type
301
primary cell
202
tissue
50
in vitro differentiated cells
31
cell line
1
stem cell
Organ
957
epithelium
650
kidney
466
connective tissue
460
brain
372
musculature of body
311
lung
289
intestine
275
pancreas
261
vasculature
247
heart
240
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
196
blood vessel
174
large intestine
157
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
88
adipose tissue
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphatic vessel
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
21
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
vagina
5
trachea
nose
1
pericardium
Project
500
AMP
59
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
509
hg19
162
GRCh38
2
hg18
files.file_type!
bigBed bed9
organ_slims!
nose
vagina
BIOSAMPLE
TYPE
585 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
3
4
16
1
2
6
pericyte cell
3
10
10
1
osteoblast
2
2
5
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
+ See 49 more…
tissue
stomach
40
21
3
19
1
1
1
adipose tissue
7
8
2
6
3
1
4
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
stomach smooth muscle
4
2
3
+ See 12 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
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