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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
255
gene expression
216
accessible chromatin
132
target gene predictions
122
candidate regulatory elements
92
differential activity
57
chromatin state
43
binding sites
41
variant allelic effects
28
histone modifications
6
eQTL
2
caQTL
Date released
202
February, 2021
169
September, 2022
155
September, 2023
131
November, 2021
76
February, 2024
38
March, 2023
34
May, 2021
27
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
12
February, 2023
12
January, 2020
10
May, 2024
9
February, 2020
8
March, 2020
7
April, 2020
6
August, 2018
6
October, 2022
5
October, 2019
4
March, 2024
3
August, 2017
3
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
Available data
583
bed bed3+
326
tsv
178
bigWig
78
txt
56
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
bigBed bed9
Organism
994
Homo sapiens
Biosample type
831
primary cell
94
tissue
43
cell line
26
in vitro differentiated cells
Organ
957
epithelium
650
kidney
466
connective tissue
460
brain
372
musculature of body
311
lung
289
intestine
275
pancreas
261
vasculature
247
heart
240
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
196
blood vessel
174
large intestine
157
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
88
adipose tissue
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphatic vessel
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
21
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
679
AMP
155
KPMP
131
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
640
hg19
255
GRCh38
files.file_type!
bigBed bed9
BIOSAMPLE
TYPE
994 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
3
2
2
1
1
2
hepatocyte
13
8
3
2
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
foreskin keratinocyte
4
11
4
+ See 147 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus muscularis mucosa
1
2
5
2
1
esophagus squamous epithelium
1
2
6
2
esophagus
3
4
2
1
+ See 22 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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