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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
23
candidate regulatory elements
23
gene expression
21
accessible chromatin
20
target gene predictions
15
chromatin state
12
binding sites
12
histone modifications
8
eQTL
4
differential activity
3
Fine-mapped variants
3
variant allelic effects
1
caQTL
Date released
43
September, 2022
29
February, 2024
22
February, 2021
10
August, 2021
10
March, 2020
4
June, 2020
4
March, 2023
4
November, 2021
3
May, 2021
2
August, 2017
2
February, 2020
2
January, 2020
2
May, 2020
2
May, 2022
1
January, 2022
1
July, 2020
1
May, 2024
1
November, 2019
1
October, 2022
1
September, 2018
Available data
94
bed bed3+
27
tsv
21
bigWig
13
bed bed9
3
csv
1
bam
bigBed bed9
Organism
145
Homo sapiens
Biosample type
57
tissue
55
primary cell
26
cell line
7
in vitro differentiated cells
Organ
957
epithelium
650
kidney
connective tissue
460
brain
372
musculature of body
311
lung
289
intestine
275
pancreas
261
vasculature
247
heart
240
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
196
blood vessel
174
large intestine
157
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
88
adipose tissue
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
73
adrenal gland
73
artery
73
placenta
64
penis
64
ureter
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
24
lymphatic vessel
24
lymphoid tissue
24
nerve
23
ovary
23
thyroid gland
21
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
141
AMP
4
ENCODE
Genome assembly (visualization)
115
hg19
58
GRCh38
2
hg18
files.file_type!
bigBed bed9
organ_slims!
connective tissue
lymph node
BIOSAMPLE
TYPE
145 results
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Clear Filters
candidate regulatory elements
gene expression
accessible chromatin
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
differential activity
Fine-mapped variants
variant allelic effects
caQTL
tissue
liver
13
1
4
10
8
1
2
7
1
1
right lobe of liver
2
1
1
1
1
3
primary cell
hepatocyte
2
13
8
3
1
1
4
2
endothelial cell of hepatic sinusoid
4
6
6
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
cell line
HepG2
2
2
3
2
3
5
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
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