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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
1
DNase-seq
1
pCHi-C
Assay category
20
DNA binding
1
DNA accessibility
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
7
December, 2018
7
January, 2019
7
November, 2018
1
March, 2020
October, 2017
Available data
23
bam
23
fastq
15
bigWig
13
bed narrowPeak
13
bigBed narrowPeak
2
bed bedMethyl
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
22
Homo sapiens
Biosample type
22
tissue
Organ
903
pancreas
785
liver
486
epithelium
342
kidney
319
heart
268
brain
225
connective tissue
168
vasculature
163
blood vessel
115
limb
102
adipose tissue
92
musculature of body
75
artery
69
blood
69
bodily fluid
60
eye
43
nerve
37
embryo
22
spleen
22
vein
20
lung
18
ureter
9
bone element
8
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
22
AMP
Genome assembly (visualization)
13
GRCh38
13
hg19
Lab
22
AMP-T2D consortium
files.file_type!
bigBed bedMethyl
month_released!
February, 2021
October, 2017
BIOSAMPLE
ASSAY
22 results
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ChIP-seq
DNase-seq
pCHi-C
tissue
spleen
20
1
1
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