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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ChIP-seq
8
DNase-seq
1
FAIRE-seq
1
single cell RNA-seq
Assay category
55
DNA binding
9
DNA accessibility
1
Transcription
Target of assay
52
transcription factor
19
RNA binding protein
16
recombinant protein
5
chromatin remodeller
3
control
3
other context
3
other post-translational modification
Date released
406
November, 2017
397
May, 2021
341
May, 2020
314
August, 2021
289
October, 2019
282
August, 2017
260
February, 2021
200
May, 2022
193
June, 2019
166
July, 2018
160
February, 2023
120
May, 2019
94
December, 2017
80
April, 2019
73
September, 2018
68
July, 2019
65
November, 2018
62
March, 2020
60
November, 2019
59
September, 2020
53
October, 2018
47
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
22
February, 2020
22
October, 2017
19
April, 2020
14
May, 2023
12
January, 2019
11
September, 2017
10
December, 2019
10
November, 2020
8
December, 2018
8
January, 2021
7
August, 2020
6
January, 2018
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
72
fastq
71
bam
67
bigWig
60
bed narrowPeak
60
bigBed narrowPeak
8
bed bed3+
8
bed broadPeak
8
bigBed broadPeak
7
bed bedMethyl
bigBed bedMethyl
1
csv
Organism
65
Homo sapiens
Biosample type
45
cell line
19
tissue
1
primary cell
Organ
52
liver
blood
15
bodily fluid
7
spleen
3
pancreas
2
brain
1
adipose tissue
connective tissue
Project
65
AMP
Genome assembly (visualization)
59
GRCh38
58
hg19
Lab
65
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
files.file_type!
bigBed bedMethyl
organ_slims!
blood
connective tissue
eye
BIOSAMPLE
ASSAY
65 results
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ChIP-seq
DNase-seq
FAIRE-seq
single cell RNA-seq
cell line
HepG2
45
tissue
spleen
6
1
liver
4
2
body of pancreas
2
brain
2
pancreas
1
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primary cell
pancreatic cell
1
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