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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
total RNA-seq
16
ATAC-seq
4
pCHi-C
3
DNase-seq
2
ChIP-seq
Assay category
19
DNA accessibility
17
Transcription
2
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
21
October, 2019
17
February, 2023
3
June, 2019
1
February, 2020
Available data
18
bed narrowPeak
3
bam
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
3
bigBed narrowPeak
3
bigWig
3
tsv
Organism
42
Homo sapiens
Biosample type
42
tissue
Organ
931
pancreas
730
liver
671
connective tissue
epithelium
484
adipose tissue
374
heart
347
kidney
281
brain
229
vasculature
225
blood vessel
159
bone element
140
artery
121
limb
92
musculature of body
59
blood
59
bodily fluid
59
eye
43
nerve
37
embryo
23
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
42
AMP
Genome assembly (visualization)
18
hg19
3
GRCh38
Lab
42
AMP-T2D consortium
files.file_type!
bigBed bedMethyl
organ_slims!
epithelium
mammary gland
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
42 results
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Clear Filters
total RNA-seq
ATAC-seq
pCHi-C
DNase-seq
ChIP-seq
tissue
islet of Langerhans
14
1
4
2
retina
3
15
3
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