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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
ChIP-seq
6
total RNA-seq
4
Hi-C
1
ATAC-seq
1
WGBS
Assay category
43
DNA binding
6
Transcription
4
3D chromatin structure
1
DNA accessibility
1
DNA methylation
Target of assay
31
histone
31
histone modification
20
broad histone mark
12
control
11
narrow histone mark
Date released
41
October, 2019
7
May, 2019
5
July, 2019
2
February, 2020
Available data
82
bam
70
bigWig
65
bed narrowPeak
64
bigBed narrowPeak
34
bed bed3+
34
bed broadPeak
bigBed broadPeak
6
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
55
Homo sapiens
Biosample type
55
tissue
Organ
939
pancreas
727
liver
675
connective tissue
502
epithelium
489
adipose tissue
363
heart
271
kidney
248
brain
219
vasculature
blood vessel
bone element
137
artery
86
limb
69
blood
69
bodily fluid
63
musculature of body
57
eye
41
nerve
37
embryo
24
spleen
20
lung
18
vein
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
55
AMP
Genome assembly (visualization)
35
GRCh38
35
hg19
Lab
55
AMP-T2D consortium
files.file_type!
bigBed broadPeak
csv
organ_slims!
blood vessel
bone element
BIOSAMPLE
ASSAY
55 results
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Clear Filters
ChIP-seq
total RNA-seq
Hi-C
ATAC-seq
WGBS
tissue
tibial nerve
35
5
1
muscle of leg
7
1
gastrocnemius medialis
1
4
islet of Langerhans
1
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