Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 97ChIP-seq
  • 1DNase-seq
Assay category
  • 97DNA binding
  • 1DNA accessibility
Target of assay
  • 50transcription factor
  • 32histone
  • 32histone modification
  • 16broad histone mark
  • 16narrow histone mark
  • 15control
  • 11RNA binding protein
  • 1other context
  • 1other post-translational modification
Date released
  • 51November, 2017
  • 43August, 2017
  • 2October, 2018
  • 2September, 2017
Available data
  • 106bam
  • 106fastq
  • 101bigWig
  • 91bed narrowPeak
  • 52bigBed narrowPeak
  • 12bed bed3+
  • 9bed broadPeak
  • bigBed broadPeak
  • 3tar
  • 1tagAlign
Organism
  • 97Homo sapiens
Biosample type
  • 48cell line
  • 31in vitro differentiated cells
  • 16tissue
  • 3primary cell
Organ
  • 50liver
  • 31connective tissue
  • 14pancreas
  • 3brain
  • 2epithelium
  • 2vasculature
  • 1blood vessel
Project
  • 98AMP
Genome assembly (visualization)
  • 96hg19
  • 65GRCh38
Lab
  • 98AMP-T2D consortium
Audit category:
  • 6missing controlled_by
files.file_type!
  • bigBed broadPeak
BIOSAMPLE
ASSAY

98 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
DNase-seq
cell line
HepG248
in vitro differentiated cells
adipocyte31
tissue
islet of Langerhans101
pancreas3
liver2
primary cell
astrocyte of the cerebellum1
brain microvascular endothelial cell1
choroid plexus epithelial cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego