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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 283ChIP-seq
  • 89total RNA-seq
  • 9WGBS
  • 6RRBS
  • 5ATAC-seq
  • 3DNase-seq
  • 1FAIRE-seq
Assay category
  • 283DNA binding
  • 89Transcription
  • 15DNA methylation
  • 9DNA accessibility
Target of assay
  • 188histone modification
  • 187histone
  • 103broad histone mark
  • 83narrow histone mark
  • 50control
  • 45transcription factor
  • 6RNA binding protein
  • 2chromatin remodeller
Date released
  • 715February, 2021
  • 399May, 2021
  • 396August, 2017
  • 342November, 2017
  • 341May, 2020
  • 319August, 2021
  • 305October, 2019
  • 205February, 2023
  • 200May, 2022
  • 168July, 2018
  • 120May, 2019
  • 108July, 2019
  • 94December, 2017
  • 80April, 2019
  • 79November, 2018
  • 76October, 2018
  • 73September, 2018
  • 64March, 2020
  • 61November, 2019
  • 59September, 2020
  • 49April, 2018
  • 47September, 2023
  • 40May, 2024
  • 39February, 2018
  • 35December, 2018
  • 31June, 2019
  • 30January, 2019
  • 25February, 2020
  • 23October, 2017
  • 19April, 2020
  • 16January, 2021
  • 15May, 2023
  • 15November, 2020
  • 11September, 2017
  • 10December, 2019
  • 8January, 2018
  • 7August, 2020
  • 5March, 2019
  • 5March, 2023
  • 4August, 2018
  • 4October, 2022
  • 3June, 2018
  • 1August, 2022
Available data
  • 287fastq
  • 282bam
  • 272bigWig
  • 142bed narrowPeak
  • 89tsv
  • 85tagAlign
  • 42bigBed narrowPeak
  • 41bed broadPeak
  • 33bed bed3+
  • bigBed broadPeak
  • 6bed bedMethyl
  • 6bigBed bedMethyl
Organism
  • 389Homo sapiens
Biosample type
  • 284tissue
  • 67in vitro differentiated cells
  • 45primary cell
Organ
  • 188pancreas
  • 124connective tissue
  • 57adipose tissue
  • 54liver
  • 29epithelium
  • 26musculature of body
Project
  • 396AMP
Genome assembly (visualization)
  • 261hg19
  • 236GRCh38
Lab
  • 396AMP-T2D consortium
Audit category:
  • 39missing controlled_by
Audit category:
  • 16inconsistent control read length
  • 2inconsistent assembly
  • 1inconsistent control run_type
files.file_type!
  • bigBed broadPeak
BIOSAMPLE
ASSAY

396 results

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Clear Filters
ChIP-seq
total RNA-seq
WGBS
RRBS
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans428911
liver4831
subcutaneous abdominal adipose tissue363
skeletal muscle tissue224
pancreas14
in vitro differentiated cells
adipocyte67
primary cell
pancreatic alpha cell131
pancreatic beta cell131
pancreatic endocrine cell12
skeletal muscle myoblast211
pancreatic acinar cell1
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