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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
single cell RNA-seq
34
ChIP-seq
16
total RNA-seq
3
ATAC-seq
Assay category
56
Transcription
34
DNA binding
3
DNA accessibility
Target of assay
28
transcription factor
4
control
2
RNA binding protein
2
chromatin remodeller
Date released
712
February, 2021
399
May, 2021
342
August, 2017
298
October, 2019
284
August, 2021
205
February, 2023
168
July, 2018
160
May, 2022
147
May, 2020
120
May, 2019
98
July, 2019
85
November, 2017
80
April, 2019
76
October, 2018
73
September, 2018
61
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
34
December, 2018
31
December, 2017
June, 2019
29
November, 2018
25
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
15
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
75
fastq
34
bam
33
bigWig
30
bed narrowPeak
30
bigBed narrowPeak
19
zippedFastqFolder
Organism
93
Homo sapiens
Biosample type
59
primary cell
27
cell line
7
tissue
Organ
27
blood
27
bodily fluid
19
epithelium
19
pancreas
7
spleen
liver
Project
59
HPAP
34
AMP
Genome assembly (visualization)
33
GRCh38
30
hg19
Lab
59
Klaus Kaestner, Upenn
34
AMP-T2D consortium
Audit category:
1
inconsistent control
files.file_type!
bigBed broadPeak
month_released!
June, 2019
organ_slims!
liver
BIOSAMPLE
ASSAY
93 results
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Clear Filters
single cell RNA-seq
ChIP-seq
total RNA-seq
ATAC-seq
primary cell
Langerhans cell
40
pancreatic alpha cell
15
2
pancreatic beta cell
1
1
cell line
GM12878
27
tissue
spleen
7
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