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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
82
ChIP-seq
Assay category
82
DNA binding
Target of assay
161
histone
161
histone modification
82
broad histone mark
79
narrow histone mark
61
control
25
transcription factor
9
RNA binding protein
5
nucleotide modification
3
other context
3
other post-translational modification
Date released
32
August, 2017
19
October, 2018
17
September, 2018
6
November, 2019
4
January, 2019
4
October, 2019
Available data
77
bigWig
74
bam
72
bed narrowPeak
56
fastq
34
bigBed narrowPeak
8
bed broadPeak
8
tagAlign
6
bed bed3+
Organism
78
Homo sapiens
Biosample type
45
tissue
27
primary cell
10
cell line
Organ
78
pancreas
70
brain
57
heart
44
connective tissue
43
blood vessel
43
vasculature
42
epithelium
34
limb
34
liver
20
adipose tissue
20
musculature of body
16
nerve
15
kidney
14
artery
7
vein
4
embryo
4
spleen
0
gonad
Project
82
AMP
Genome assembly (visualization)
77
hg19
73
GRCh38
Lab
82
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
22
missing controlled_by
Audit category:
3
inconsistent control read length
1
inconsistent assembly
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
82 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
14
body of pancreas
11
endocrine pancreas
8
pancreas
8
spleen
4
primary cell
pancreatic endocrine cell
11
pancreatic ductal cell
6
pancreatic acinar cell
4
pancreatic alpha cell
3
pancreatic beta cell
3
cell line
EndoC_BH1
6
Panc1
4
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