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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
386
total RNA-seq
49
ChIP-seq
6
WGBS
Assay category
386
Transcription
49
DNA binding
6
DNA methylation
Target of assay
31
histone
31
histone modification
20
broad histone mark
12
transcription factor
11
narrow histone mark
6
control
Date released
386
February, 2021
55
August, 2017
18
October, 2018
12
July, 2019
2
February, 2020
1
August, 2018
1
August, 2021
1
February, 2023
1
January, 2018
1
March, 2020
1
May, 2023
1
November, 2019
1
October, 2017
Available data
403
bam
403
bigWig
386
tsv
18
fastq
8
tagAlign
4
bed bed3+
3
bed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
bigBed narrowPeak
1
bed broadPeak
Organism
441
Homo sapiens
Biosample type
441
tissue
Organ
577
connective tissue
441
adipose tissue
203
pancreas
150
bone element
66
artery
66
blood vessel
66
heart
66
vasculature
58
epithelium
51
liver
26
musculature of body
8
kidney
8
skeleton
6
limb
Project
441
AMP
Genome assembly (visualization)
400
GRCh38
399
hg19
Lab
441
AMP-T2D consortium
Audit category:
12
missing controlled_by
files.file_type!
bigBed narrowPeak
hic
BIOSAMPLE
ASSAY
441 results
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total RNA-seq
ChIP-seq
WGBS
tissue
adipose tissue
381
1
3
subcutaneous abdominal adipose tissue
36
3
white adipose tissue
12
visceral abdominal adipose tissue
3
subcutaneous adipose tissue
2
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