Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
4
pCHi-C
1
ChIP-seq
1
RRBS
Assay category
28
DNA accessibility
19
Transcription
1
DNA binding
1
DNA methylation
Target of assay
histone
2
histone modification
2
narrow histone mark
1
control
Date released
31
February, 2023
19
October, 2019
1
February, 2020
1
July, 2019
1
June, 2019
Available data
32
bed narrowPeak
6
bam
bigBed narrowPeak
5
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
53
Homo sapiens
Biosample type
51
tissue
2
primary cell
Organ
746
pancreas
587
connective tissue
450
adipose tissue
378
epithelium
364
liver
255
heart
241
kidney
159
bone element
145
vasculature
143
blood vessel
116
artery
63
brain
53
eye
37
limb
28
musculature of body
25
embryo
20
lung
17
nerve
16
skeleton
15
blood
15
bodily fluid
12
spleen
2
intestine
2
pericardium
2
thymus
2
vein
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
53
AMP
Genome assembly (visualization)
28
hg19
Lab
53
AMP-T2D consortium
files.file_type!
bigBed narrowPeak
hic
organ_slims!
skin of body
target.investigated_as!
histone
BIOSAMPLE
ASSAY
53 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
total RNA-seq
pCHi-C
ChIP-seq
RRBS
tissue
islet of Langerhans
1
14
4
retina
15
3
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
1
1
Download