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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
total RNA-seq
45
ATAC-seq
7
ChIP-seq
2
single cell RNA-seq
1
pCHi-C
Assay category
58
Transcription
45
DNA accessibility
7
DNA binding
Target of assay
7
control
Date released
60
February, 2021
35
February, 2023
6
October, 2019
3
July, 2019
2
August, 2021
2
February, 2020
2
May, 2019
1
March, 2020
Available data
88
bam
71
bigWig
60
bed narrowPeak
59
tsv
bigBed narrowPeak
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
111
Homo sapiens
Biosample type
60
cell line
49
tissue
2
primary cell
Organ
798
pancreas
606
connective tissue
457
adipose tissue
412
epithelium
348
liver
270
heart
247
kidney
159
bone element
143
vasculature
141
blood vessel
110
artery
89
brain
55
eye
38
limb
33
embryo
30
musculature of body
20
lung
17
nerve
16
skeleton
15
blood
15
bodily fluid
12
spleen
5
gonad
5
ovary
5
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
111
AMP
Genome assembly (visualization)
99
GRCh38
64
hg19
Lab
111
AMP-T2D consortium
files.file_type!
bigBed narrowPeak
tagAlign
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
111 results
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total RNA-seq
ATAC-seq
ChIP-seq
single cell RNA-seq
pCHi-C
cell line
smooth muscle cell of the coronary artery
52
8
tissue
coronary artery
1
36
2
tibial artery
1
1
5
pulmonary artery
2
sigmoid colon
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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