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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
62
total RNA-seq
12
ATAC-seq
1
pCHi-C
Assay category
62
Transcription
12
DNA accessibility
Date released
150
February, 2021
8
February, 2023
1
May, 2021
Available data
88
txt
66
bam
58
bigWig
58
tsv
8
bed narrowPeak
4
bed bed3
Organism
159
Homo sapiens
Biosample type
158
tissue
1
primary cell
Organ
855
pancreas
656
connective tissue
481
adipose tissue
448
epithelium
432
liver
299
heart
250
kidney
159
bone element
159
brain
153
vasculature
151
blood vessel
116
artery
55
eye
49
musculature of body
38
limb
37
embryo
20
lung
17
nerve
16
skeleton
15
blood
15
bodily fluid
12
spleen
9
vein
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
158
AMP
1
T1D
Genome assembly (visualization)
70
hg19
66
GRCh38
Lab
158
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
files.file_type!
bigBed narrowPeak
vcf
lab.title!
Anna Gloyn, Oxford
BIOSAMPLE
ASSAY
159 results
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RNA microarray
total RNA-seq
ATAC-seq
pCHi-C
tissue
bone element
84
bone tissue
58
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
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primary cell
megakaryocyte
1
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