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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
19
total RNA-seq
4
pCHi-C
1
ChIP-seq
1
RRBS
Assay category
28
DNA accessibility
19
Transcription
1
DNA binding
1
DNA methylation
Target of assay
histone
2
histone modification
2
narrow histone mark
1
control
Date released
31
February, 2023
19
October, 2019
1
February, 2020
1
July, 2019
1
June, 2019
Available data
32
bed narrowPeak
6
bam
bigBed narrowPeak
5
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
53
Homo sapiens
Biosample type
51
tissue
2
primary cell
Organ
753
pancreas
587
connective tissue
450
adipose tissue
384
epithelium
365
liver
258
heart
242
kidney
159
bone element
148
vasculature
146
blood vessel
116
artery
63
brain
53
eye
37
limb
30
musculature of body
25
embryo
20
lung
17
nerve
16
skeleton
15
blood
15
bodily fluid
12
spleen
4
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
53
AMP
Genome assembly (visualization)
28
hg19
Lab
53
AMP-T2D consortium
files.file_type!
bigBed narrowPeak
vcf
target.investigated_as!
histone
BIOSAMPLE
ASSAY
53 results
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Clear Filters
ATAC-seq
total RNA-seq
pCHi-C
ChIP-seq
RRBS
tissue
islet of Langerhans
1
14
4
retina
15
3
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
1
1
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