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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
total RNA-seq
44
ATAC-seq
8
ChIP-seq
2
single cell RNA-seq
Assay category
57
Transcription
44
DNA accessibility
8
DNA binding
Target of assay
4
control
4
transcription factor
Date released
66
February, 2021
35
February, 2023
3
July, 2019
2
August, 2021
2
May, 2019
1
February, 2020
Available data
76
bam
64
bigWig
57
tsv
53
bed narrowPeak
6
tagAlign
bigBed narrowPeak
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
109
Homo sapiens
Biosample type
66
cell line
41
tissue
2
primary cell
Organ
855
pancreas
656
connective tissue
481
adipose tissue
448
epithelium
433
liver
299
heart
186
kidney
159
bone element
159
brain
153
vasculature
151
blood vessel
116
artery
55
eye
49
musculature of body
limb
37
embryo
20
lung
17
nerve
16
skeleton
15
blood
15
bodily fluid
12
spleen
9
vein
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
109
AMP
Genome assembly (visualization)
102
GRCh38
67
hg19
Lab
109
AMP-T2D consortium
files.file_type!
bigBed narrowPeak
xls
organ_slims!
limb
BIOSAMPLE
ASSAY
109 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
single cell RNA-seq
cell line
smooth muscle cell of the coronary artery
52
8
6
tissue
coronary artery
1
36
2
pulmonary artery
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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