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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
MeRIP-seq
5
GRO-seq
4
ATAC-seq
4
total RNA-seq
Assay category
4
DNA accessibility
4
Transcription
Target of assay
5
control
5
nucleotide modification
Date released
February, 2021
399
May, 2021
369
August, 2017
341
May, 2020
319
August, 2021
244
October, 2019
205
February, 2023
168
July, 2018
106
July, 2019
94
November, 2017
66
May, 2022
64
March, 2020
61
November, 2019
59
September, 2018
49
April, 2018
47
September, 2023
44
December, 2017
40
May, 2024
40
September, 2020
39
February, 2018
31
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
October, 2017
16
April, 2019
16
January, 2021
15
May, 2023
15
November, 2018
15
November, 2020
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
13
bigWig
6
bam
5
fastq
4
tsv
2
bed narrowPeak
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
bigBed narrowPeak
Organism
23
Homo sapiens
Biosample type
7
cell line
6
tissue
5
primary cell
4
in vitro differentiated cells
1
stem cell
Organ
10
pancreas
6
connective tissue
6
epithelium
1
adipose tissue
1
blood
1
bodily fluid
1
embryo
1
musculature of body
Project
23
AMP
Genome assembly (visualization)
8
hg19
5
GRCh38
5
hg18
Lab
13
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
files.file_type!
bigBed narrowPeak
zippedFastqFolder
month_released!
February, 2021
BIOSAMPLE
ASSAY
23 results
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Clear Filters
MeRIP-seq
GRO-seq
ATAC-seq
total RNA-seq
cell line
EndoC_BH1
6
GM12878
1
tissue
islet of Langerhans
4
adipose tissue
1
skeletal muscle tissue
1
primary cell
osteoblast
1
4
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
stem cell
hESC
1
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