Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 54ChIP-seq
Assay category
  • 54DNA binding
Target of assay
  • 31histone
  • 31histone modification
  • 16broad histone mark
  • 15control
  • 15narrow histone mark
  • 8transcription factor
  • 5RNA binding protein
Date released
  • 41August, 2017
  • 10November, 2017
  • 2September, 2017
  • 1October, 2018
Available data
  • 106bam
  • 106fastq
  • 101bigWig
  • 91bed narrowPeak
  • bigBed narrowPeak
  • 12bed bed3+
  • 9bed broadPeak
  • 8bigBed broadPeak
  • 3tar
  • 1tagAlign
Organism
  • 54Homo sapiens
Biosample type
  • 31in vitro differentiated cells
  • 13tissue
  • 7cell line
  • 3primary cell
Organ
  • 31connective tissue
  • 11pancreas
  • 9liver
  • 3brain
  • 2epithelium
  • 2vasculature
  • 1blood vessel
Project
  • 54AMP
Genome assembly (visualization)
  • 52hg19
  • 42GRCh38
Lab
  • 54AMP-T2D consortium
Audit category:
  • 1missing controlled_by
files.file_type!
  • bigBed narrowPeak
BIOSAMPLE
ASSAY

54 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
in vitro differentiated cells
adipocyte31
tissue
islet of Langerhans10
liver2
pancreas1
cell line
HepG27
primary cell
astrocyte of the cerebellum1
brain microvascular endothelial cell1
choroid plexus epithelial cell1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego