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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ChIP-seq
2
Hi-C
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
4
DNA binding
4
Transcription
2
3D chromatin structure
Target of assay
4
control
Date released
715
February, 2021
397
May, 2021
369
August, 2017
341
May, 2020
244
October, 2019
205
February, 2023
200
May, 2022
183
August, 2021
168
July, 2018
106
July, 2019
94
November, 2017
64
March, 2020
61
November, 2019
59
September, 2018
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
31
December, 2017
31
October, 2018
26
February, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
October, 2017
16
April, 2019
16
January, 2021
15
November, 2018
15
November, 2020
10
December, 2019
9
January, 2019
8
June, 2019
7
August, 2020
7
January, 2018
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
1
May, 2023
Available data
35
fastq
34
bam
30
bed narrowPeak
bigBed narrowPeak
30
bigWig
1
hic
Organism
6
Homo sapiens
Biosample type
4
tissue
3
cell line
2
stem cell
1
primary cell
Organ
4
spleen
1
liver
Project
5
AMP
4
community
1
ITG
Genome assembly (visualization)
1
GRCh38
Lab
5
AMP-T2D consortium
4
Anna Gloyn, Oxford
1
ITG
files.file_type!
bigBed narrowPeak
lab.title!
Katalin Susztak, Upenn
organ_slims!
embryo
BIOSAMPLE
ASSAY
10 results
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Clear Filters
ChIP-seq
Hi-C
CRISPR RNA-seq
CRISPRi RNA-seq
shRNA RNA-seq
siRNA RNA-seq
tissue
spleen
4
cell line
EndoC-BH1
1
1
HepG2
1
stem cell
SB Ad3.1
1
1
primary cell
chondrocytes
1
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