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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ChIP-seq
2
WGBS
1
ATAC-seq
1
pCHi-C
Assay category
8
DNA binding
2
DNA methylation
1
DNA accessibility
Target of assay
8
control
Date released
5
November, 2018
4
December, 2018
1
January, 2019
1
March, 2020
1
October, 2017
Available data
24
bam
24
fastq
16
bigWig
14
bed narrowPeak
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
12
Homo sapiens
Biosample type
12
tissue
Organ
803
pancreas
655
connective tissue
481
adipose tissue
448
epithelium
433
liver
299
heart
250
kidney
159
brain
158
bone element
153
vasculature
151
blood vessel
116
artery
55
eye
49
musculature of body
38
limb
embryo
20
lung
17
nerve
16
skeleton
12
spleen
9
vein
7
blood
7
bodily fluid
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
1
adrenal gland
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
12
AMP
Genome assembly (visualization)
3
GRCh38
1
hg19
Lab
12
AMP-T2D consortium
files.file_type!
bigBed narrowPeak
lab.title!
Kyle Gaulton, UCSD
Maike Sander, UCSD
organ_slims!
embryo
BIOSAMPLE
ASSAY
12 results
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ChIP-seq
WGBS
ATAC-seq
pCHi-C
tissue
spleen
8
2
1
1
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