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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ChIP-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
Hi-C
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
8
DNA binding
4
Transcription
1
3D chromatin structure
Target of assay
8
control
Date released
715
February, 2021
399
May, 2021
369
August, 2017
341
May, 2020
319
August, 2021
244
October, 2019
205
February, 2023
200
May, 2022
168
July, 2018
106
July, 2019
94
November, 2017
63
March, 2020
61
November, 2019
59
September, 2018
59
September, 2020
49
April, 2018
47
September, 2023
44
December, 2017
40
May, 2024
39
February, 2018
31
October, 2018
25
February, 2020
23
May, 2019
17
October, 2017
16
April, 2019
16
January, 2021
15
May, 2023
15
November, 2018
15
November, 2020
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
218
bam
210
bed narrowPeak
bigBed narrowPeak
210
bigWig
187
bed bed3+
187
bed broadPeak
187
bigBed broadPeak
1
hic
Organism
9
Homo sapiens
Biosample type
9
primary cell
2
cell line
2
stem cell
Organ
3
connective tissue
2
epithelium
2
heart
2
musculature of body
1
eye
1
kidney
Project
8
AMP
4
community
1
ITG
Genome assembly (visualization)
1
GRCh38
Lab
8
AMP-T2D consortium
4
Anna Gloyn, Oxford
1
ITG
Audit category:
4
inconsistent ontology term
files.file_type!
bigBed narrowPeak
lab.title!
Xin Sun, UCSD
organ_slims!
lung
BIOSAMPLE
ASSAY
13 results
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Clear Filters
ChIP-seq
CRISPR RNA-seq
CRISPRi RNA-seq
Hi-C
shRNA RNA-seq
siRNA RNA-seq
primary cell
cardiac fibroblast
2
cardiac muscle cell
1
chondrocytes
1
epithelial cell of proximal tubule
1
mesenchymal stem cell
1
+ See 3 more…
cell line
EndoC-BH1
1
1
stem cell
SB Ad3.1
1
1
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