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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
62
total RNA-seq
12
ATAC-seq
1
pCHi-C
Assay category
62
Transcription
12
DNA accessibility
Date released
150
February, 2021
8
February, 2023
1
March, 2020
Available data
88
txt
66
bam
59
tsv
58
bigWig
8
bed narrowPeak
4
bed bed3
Organism
159
Homo sapiens
Biosample type
159
tissue
Organ
651
connective tissue
634
pancreas
481
adipose tissue
362
liver
290
epithelium
259
heart
159
brain
158
bone element
153
vasculature
151
blood vessel
116
artery
59
kidney
55
eye
49
musculature of body
38
limb
37
embryo
17
nerve
16
skeleton
12
spleen
9
vein
7
blood
7
bodily fluid
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
1
adrenal gland
1
esophagus
1
large intestine
1
lung
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
thymus
1
urinary bladder
Project
159
AMP
Genome assembly (visualization)
70
hg19
66
GRCh38
Lab
159
AMP-T2D consortium
19
Xin Sun, UCSD
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
159 results
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RNA microarray
total RNA-seq
ATAC-seq
pCHi-C
tissue
bone element
84
bone tissue
58
acetabular part of hip bone
1
1
ilium
1
1
ischium
1
1
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