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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
snATAC-seq
6
ChIP-seq
1
ATAC-seq
1
total RNA-seq
Assay category
9
DNA accessibility
6
DNA binding
1
Transcription
Target of assay
6
control
Date released
October, 2019
8
January, 2021
3
January, 2019
3
November, 2018
1
February, 2020
1
January, 2018
Available data
60
bam
60
fastq
55
bigWig
54
bed narrowPeak
bigBed narrowPeak
1
tsv
Organism
16
Homo sapiens
Biosample type
8
primary cell
7
cell line
1
tissue
Organ
844
pancreas
655
connective tissue
481
adipose tissue
427
epithelium
426
liver
280
heart
216
kidney
159
bone element
139
vasculature
137
blood vessel
110
artery
73
brain
49
musculature of body
37
embryo
34
eye
20
lung
16
skeleton
15
blood
15
bodily fluid
15
limb
12
spleen
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
1
vein
Project
8
AMP
8
T1D
Genome assembly (visualization)
1
hg19
Lab
8
AMP-T2D consortium
8
Kyle Gaulton, UCSD
files.file_type!
bigBed narrowPeak
month_released!
April, 2019
October, 2019
BIOSAMPLE
ASSAY
16 results
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Clear Filters
snATAC-seq
ChIP-seq
ATAC-seq
total RNA-seq
primary cell
peripheral blood mononuclear cell
8
cell line
GM12878
6
1
tissue
tibial nerve
1
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