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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
8
ATAC-seq
7
total RNA-seq
4
Hi-C
1
WGBS
Assay category
17
DNA binding
8
DNA accessibility
7
Transcription
4
3D chromatin structure
1
DNA methylation
Target of assay
17
control
1
histone
1
histone modification
narrow histone mark
Date released
22
October, 2019
6
February, 2021
5
July, 2019
3
February, 2020
1
May, 2019
Available data
100
bam
78
bed narrowPeak
77
bigWig
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
37
Homo sapiens
Biosample type
37
tissue
Organ
644
pancreas
626
connective tissue
470
adipose tissue
387
liver
381
epithelium
281
heart
198
kidney
159
bone element
152
vasculature
150
blood vessel
116
artery
75
brain
53
eye
42
musculature of body
37
limb
29
embryo
20
lung
17
nerve
16
skeleton
15
blood
15
bodily fluid
12
spleen
8
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
37
AMP
Genome assembly (visualization)
13
GRCh38
12
hg19
Lab
37
AMP-T2D consortium
files.file_type!
bigBed narrowPeak
month_released!
July, 2018
September, 2023
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
37 results
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ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
WGBS
tissue
tibial nerve
11
1
5
tibial artery
5
1
1
gastrocnemius medialis
1
4
muscle of leg
1
1
distal epiphysis of femur
1
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